Support for on-disk formats like BPCells · Issue #207 · satijalab/sctransform
github.com/satijalab/sctransform/issues/207
Feb 27, 2026
3
SCTransform Pearson Residuals — sctransform_pearson
bnprks.github.io/BPCells/reference/sctransform_pearson.html
Feb 27, 2026
1
convert seurat object to BPCell · Issue #205 · bnprks/BPCells
github.com/bnprks/BPCells/issues/205
Feb 27, 2026
5
Seurat における SCTransform の理論を、関数のデバッグ結果からガッツリ追ってみた。 - Qiita
qiita.com/Refine/items/c58d9cb9814e33a1092f
Feb 27, 2026
1
Analysis, visualization, and integration of Visium HD spatial datasets with Seurat
satijalab.org/seurat/articles/seurat5_sketch_analysis
Feb 18, 2026
1
Analysis, visualization, and integration of Visium HD spatial datasets with Seurat
satijalab.org/seurat/articles/get_started_v5_new
Feb 18, 2026
1
Brainstem neurons coordinate the bladder and urethral sphincter for urination
www.biorxiv.org/content/10.1101/2024.10.01.616107v2
Feb 7, 2026
1
Comprehensive Single-Cell Transcriptomic Atlas of the Mouse Pons and Medulla - Scientific Data
www.nature.com/articles/s41597-025-06093-3
Jan 19, 2026
1
Serotonin neurons in mating female mice are activated by male ejaculation
www.cell.com/current-biology/fulltext/S0960-9822(23)01320-9
Jan 15, 2026
1
A neural circuit for male sexual behavior and reward
www.cell.com/cell/fulltext/S0092-8674(23)00798-5
Jan 15, 2026
1
A galanin-positive population of lumbar spinal cord neurons modulates sexual arousal and copulatory behavior in male mice - Nature Communications
www.nature.com/articles/s41467-025-63877-2
Jan 15, 2026
1
Identification and Importance of Brown Adipose Tissue in Adult Humans | NEJM
www.nejm.org/doi/full/10.1056/NEJMoa0810780
Jan 3, 2026
1
Comprehensive quantification of metabolic flux during acute cold stress in mice - PubMed
pubmed.ncbi.nlm.nih.gov/37802078/
Dec 30, 2025
1
Cold-sensitive ventromedial hypothalamic neurons control homeostatic thermogenesis and social interaction-associated hyperthermia - PubMed
pubmed.ncbi.nlm.nih.gov/35675799/
Dec 30, 2025
1
Regulation of Body Temperature by the Nervous System
www.cell.com/neuron/fulltext/S0896-6273(18)30143-0?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0896627318301430%3Fshowall%3Dtrue
Dec 15, 2025
1
Sensory input, sex and function shape hypothalamic cell type development - Nature
www.nature.com/articles/s41586-025-08603-0
Dec 5, 2025
1
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in situ hybridizationの簡易プロトコール - ノンコーディングRNAネオタクソノミ
ncrna.jp/super-resolution/tips/item/75-in-situ-hybridization
Dec 2, 2025
1
Binary Switching of Calendar Cells in the Pituitary Defines the Phase of the Circannual Cycle in Mammals
www.sciencedirect.com/science/article/pii/S0960982215010933?via%3Dihub
Nov 27, 2025
Mechanical Allodynia Circuitry in the Dorsal Horn Is Defined by the Nature of the Injury
www.sciencedirect.com/science/article/pii/S0896627320308230?via%3Dihub
Nov 10, 2025
1
Kappa opioids inhibit spinal output neurons to suppress itch
www.science.org/doi/10.1126/sciadv.adp6038
Nov 8, 2025
5
Central circuit mechanisms of itch - Nature Communications
www.nature.com/articles/s41467-020-16859-5
Nov 7, 2025
1
Synaptic control of spinal GRPR+ neurons by local and long-range inhibitory inputs | PNAS
www.pnas.org/doi/10.1073/pnas.1905658116?url_ver=Z39.88-2003&rfr_id=ori%3Arid%3Acrossref.org&rfr_dat=cr_pub++0pubmed
Nov 6, 2025
1
A neuropeptide code for itch - Nature Reviews Neuroscience
www.nature.com/articles/s41583-021-00526-9
Nov 6, 2025
81
A Functional Topographic Map for Spinal Sensorimotor Reflexes
www.sciencedirect.com/science/article/pii/S0896627320307716?via%3Dihub
Nov 6, 2025
98
Grpr expression defines a population of superficial dorsal... : PAIN
journals.lww.com/pain/fulltext/2023/01000/grpr_expression_defines_a_population_of.21.aspx
Nov 6, 2025
88
Neuropeptide Y neurons mediate opioid-induced itch by disinhibiting GRP-GRPR microcircuits in the spinal cord - Nature Communications
www.nature.com/articles/s41467-025-62382-w?fromPaywallRec=false
Nov 5, 2025
1
Kappa opioids inhibit spinal output neurons to suppress itch
www.science.org/doi/10.1126/sciadv.adp6038?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
Nov 5, 2025
1
Gate control of mechanical itch by a subpopulation of spinal cord interneurons
www.science.org/doi/10.1126/science.aac8653
Nov 5, 2025
11
A central neural circuit for itch sensation
www.science.org/doi/10.1126/science.aaf4918
Nov 5, 2025
32
Neural circuits for pain: Recent advances and current views
www.science.org/doi/10.1126/science.aaf8933
Nov 5, 2025
33
Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression - Genome Biology
genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1874-1
Oct 22, 2025
117
Negative Binomial Regression | R Data Analysis Examples
stats.oarc.ucla.edu/r/dae/negative-binomial-regression/
Oct 22, 2025
Using sctransform in Seurat
satijalab.org/seurat/articles/sctransform_vignette.html
Oct 22, 2025
1
Genetic loci associated with heart rate variability and their effects on cardiac disease risk - Nature Communications
www.nature.com/articles/ncomms15805
Oct 19, 2025
1
Thirty loci identified for heart rate response to exercise and recovery implicate autonomic nervous system - Nature Communications
www.nature.com/articles/s41467-018-04148-1
Oct 19, 2025
1
Genetic study links components of the autonomous nervous system to heart-rate profile during exercise - Nature Communications
www.nature.com/articles/s41467-018-03395-6
Oct 19, 2025
1
Optimizing Xenium In Situ data utility by quality assessment and best-practice analysis workflows - Nature Methods
www.nature.com/articles/s41592-025-02617-2
Oct 19, 2025
1
東京大学・新領域 北川研究室
kitagawa-lab.jp/works
Oct 18, 2025
11
High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis - Nature Communications
www.nature.com/articles/s41467-023-43458-x
Oct 12, 2025
1
Single Cell Pathway Analysis
jackbibby1.github.io/SCPA/
Oct 12, 2025
1
Spatial, transcriptomic, and epigenomic analyses link dorsal horn neurons to chronic pain genetic predisposition
www.cell.com/cell-reports/fulltext/S2211-1247(24)01227-0
Sep 23, 2025
1
SpineRacks and SpinalJ for efficient analysis of neurons in a 3D reference atlas of the mouse spinal cord
star-protocols.cell.com/protocols/1177
Sep 17, 2025
1
PACAP mRNA is expressed in rat spinal cord neurons
onlinelibrary.wiley.com/doi/10.1002/cne.20015
Sep 15, 2025
1
Pituitary adenylate cyclase‐activating peptide in the rat central nervous system: An immunohistochemical and in situ hybridization study
onlinelibrary.wiley.com/doi/full/10.1002/cne.10418?sid=nlm%3Apubmed
Sep 15, 2025
2
Neuronal atlas of the dorsal horn defines its architecture and links sensory input to transcriptional cell types - Nature Neuroscience
www.nature.com/articles/s41593-018-0141-1
Sep 12, 2025
Massively Parallel Single Nucleus Transcriptional Profiling Defines Spinal Cord Neurons and Their Activity during Behavior
www.sciencedirect.com/science/article/pii/S221112471830158X?via%3Dihub
Sep 12, 2025
Estrogens influence female itch sensitivity via the spinal gastrin-releasing peptide receptor neurons | PNAS
www.pnas.org/doi/10.1073/pnas.2103536118
Sep 9, 2025
Mouse Models of Itch
www.sciencedirect.com/science/article/pii/S0022202X24020876?via%3Dihub
Sep 9, 2025
An inter-organ neural circuit for appetite suppression
www.sciencedirect.com/science/article/pii/S0092867422005918?via%3Dihub
Sep 9, 2025
Transplanted Human Stem Cell-Derived Interneuron Precursors Mitigate Mouse Bladder Dysfunction and Central Neuropathic Pain after Spinal Cord Injury
www.cell.com/cell-stem-cell/fulltext/S1934-5909(16)30267-3
Sep 2, 2025