scRNAseq analysis functions. Developed using Seurat framework.
nmikolajewicz.github.io/scMiko/index.html
Apr 21, 2025
1
Single sample scoring of molecular phenotypes - BMC Bioinformatics
bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-018-2435-4
Apr 17, 2025
1
３群以上で比較する前に必ず読もう！普通には検定できないって知ってますか？
toukeidesign.sozaiya-san.com/advance_stats14_3-group-test
Apr 14, 2025
1
Autophagy and Akt-mTOR signaling display periodic oscillations during torpor-arousal cycles in oxidative skeletal muscle of Daurian ground squirrels (Spermophilus dauricus) - Journal of Comparative Physiology B
link.springer.com/article/10.1007/s00360-019-01245-5
Apr 11, 2025
1
Nutrient-sensing AgRP neurons relay control of liver autophagy during energy deprivation
www.sciencedirect.com/science/article/pii/S1550413123001249?pes=vor&utm_source=scopus&getft_integrator=scopus
Apr 10, 2025
1
Mitophagy is required for brown adipose tissue mitochondrial homeostasis during cold challenge - Scientific Reports
www.nature.com/articles/s41598-018-26394-5
Apr 10, 2025
Chronic cold exposure induces autophagy to promote fatty acid oxidation, mitochondrial turnover, and thermogenesis in brown adipose tissue
www.sciencedirect.com/science/article/pii/S2589004221004028?via%3Dihub
Apr 10, 2025
1
A parabrachial-hypothalamic parallel circuit governs cold defense in mice - Nature Communications
www.nature.com/articles/s41467-023-40504-6
Apr 8, 2025
1
Mouse embryonic stem cells embody organismal-level cold resistance
www.sciencedirect.com/science/article/pii/S2211124723009658?via%3Dihub
Apr 8, 2025
1
iPSCs from a Hibernator Provide a Platform for Studying Cold Adaptation and Its Potential Medical Applications
www.sciencedirect.com/science/article/pii/S0092867418302903?via%3Dihub
Apr 8, 2025
1
Coping with the stress: Expression of ATF4, ATF6, and downstream targets in organs of hibernating ground squirrels
www.sciencedirect.com/science/article/pii/S000398610800266X?via%3Dihub
Apr 8, 2025
1
RBM3 mediates structural plasticity and protective effects of cooling in neurodegeneration - Nature
www.nature.com/articles/nature14142
Apr 8, 2025
Molecular Prerequisites for Diminished Cold Sensitivity in Ground Squirrels and Hamsters
www.sciencedirect.com/science/article/pii/S2211124717317503?via%3Dihub
Apr 8, 2025
1
AIDA directly connects sympathetic innervation to adaptive thermogenesis by UCP1 - Nature Cell Biology
www.nature.com/articles/s41556-021-00642-9
Apr 8, 2025
1
Multi-species genome-wide CRISPR screens identify conserved suppressors of cold-induced cell death
www.biorxiv.org/content/10.1101/2024.07.25.605098v4
Apr 8, 2025
1
Graph-based Contrastive Learning Enables Unified Integration and Niche Transfer Across Single-Cell and Spatial Multi-Omics
www.biorxiv.org/content/10.1101/2025.02.19.638965v1
Apr 8, 2025
1
mcDETECT: Decoding 3D Spatial Synaptic Transcriptomes with Subcellular-Resolution Spatial Transcriptomics
www.biorxiv.org/content/10.1101/2025.03.27.645744v1?ct=
Apr 8, 2025
1
future/README_ja.md at develop · futureverse/future
github.com/futureverse/future/blob/develop/README_ja.md
Apr 2, 2025
11
Seasonal variation in thyrotropin-releasing hormone (TRH) content of different brain regions and the pineal in the mammalian hibernator, Citellus lateralis - PubMed
pubmed.ncbi.nlm.nih.gov/6801738/
Mar 29, 2025
Single-cell transcriptomic analysis of the lateral hypothalamic area reveals molecularly distinct populations of inhibitory and excitatory neurons - Nature Neuroscience
www.nature.com/articles/s41593-019-0349-8
Mar 29, 2025
Gene expression markers of identity classes — FindMarkers
satijalab.org/seurat/reference/findmarkers
Mar 28, 2025
11
RStudio Server
chromium3.cdb.riken.jp/
Feb 21, 2025
1
Spatial transcriptomics and single-nucleus RNA sequencing reveal a transcriptomic atlas of adult human spinal cord
elifesciences.org/articles/92046
Feb 3, 2025
1
Neuroinflammation in the NTS is associated with changes in cardiovascular reflexes during systemic inflammation - Journal of Neuroinflammation
jneuroinflammation.biomedcentral.com/articles/10.1186/s12974-019-1512-6
Jan 15, 2025
1
Cold Exposure and the Metabolism of Mice, Men, and Other Wonderful Creatures | Physiology
journals.physiology.org/doi/full/10.1152/physiol.00002.2022?rfr_dat=cr_pub++0pubmed&url_ver=Z39.88-2003&rfr_id=ori%3Arid%3Acrossref.org
Jan 10, 2025
Body temperature is a more important modulator of lifespan than metabolic rate in two small mammals - Nature Metabolism
www.nature.com/articles/s42255-022-00545-5
Jan 6, 2025
1
The dual GLP-1/glucagon receptor agonist G49 mimics bariatric surgery effects by inducing metabolic rewiring and inter-organ crosstalk - Nature Communications
www.nature.com/articles/s41467-024-54080-w
Dec 26, 2024
Stochastic neuropeptide signals compete to calibrate the rate of satiation - Nature
www.nature.com/articles/s41586-024-08164-8
Dec 26, 2024
1
A brain-to-gut signal controls intestinal fat absorption - Nature
www.nature.com/articles/s41586-024-07929-5
Dec 26, 2024
1
Thermally induced neuronal plasticity in the hypothalamus mediates heat tolerance - Nature Neuroscience
www.nature.com/articles/s41593-024-01830-0
Dec 26, 2024
1
A brain-to-liver signal mediates the inhibition of liver regeneration under chronic stress in mice - Nature Communications
www.nature.com/articles/s41467-024-54827-5
Dec 26, 2024
Paraventricular hypothalamic RUVBL2 neurons suppress appetite by enhancing excitatory synaptic transmission in distinct neurocircuits - Nature Communications
www.nature.com/articles/s41467-024-53258-6
Dec 26, 2024
1
Hypothalamus-sympathetic-liver axis mediates the early phase of stress-induced hyperglycemia in the male mice - Nature Communications
www.nature.com/articles/s41467-024-52815-3
Dec 26, 2024
1
Excitation-inhibition imbalance in medial preoptic area circuits underlies chronic stress-induced depression-like states - Nature Communications
www.nature.com/articles/s41467-024-52727-2
Dec 26, 2024
1
Light modulates glucose and lipid homeostasis via the sympathetic nervous system
www.science.org/doi/10.1126/sciadv.adp3284
Dec 26, 2024
1
Identification of an ionic mechanism for ERα-mediated rapid excitation in neurons
www.science.org/doi/10.1126/sciadv.adp0696
Dec 26, 2024
1
Neuromodulator and neuropeptide sensors and probes for precise circuit interrogation in vivo
www.science.org/doi/10.1126/science.adn6671
Dec 26, 2024
Presynaptic sensor and silencer of peptidergic transmission reveal neuropeptides as primary transmitters in pontine fear circuit
www.cell.com/cell/fulltext/S0092-8674(24)00709-8
Dec 26, 2024
1
Structure-guided design of a peripherally restricted chemogenetic system
www.cell.com/cell/fulltext/S0092-8674(24)01275-3
Dec 26, 2024
Transcriptomic cell-type specificity of local cortical circuits
www.cell.com/neuron/fulltext/S0896-6273(24)00651-2
Dec 26, 2024
Leptin-activated hypothalamic BNC2 neurons acutely suppress food intake - Nature
www.nature.com/articles/s41586-024-08108-2
Dec 26, 2024
1
A top-down slow breathing circuit that alleviates negative affect in mice - Nature Neuroscience
www.nature.com/articles/s41593-024-01799-w
Dec 26, 2024
1
Parallel gut-to-brain pathways orchestrate feeding behaviors - Nature Neuroscience
www.nature.com/articles/s41593-024-01828-8
Dec 26, 2024
1
Feedforward inhibition of stress by brainstem neuropeptide Y neurons - Nature Communications
www.nature.com/articles/s41467-024-51956-9
Dec 25, 2024
1
Distinct medial amygdala oxytocin receptor neurons projections respectively control consolation or aggression in male mandarin voles - Nature Communications
www.nature.com/articles/s41467-024-51652-8
Dec 25, 2024
1
Tak1 licenses mitochondrial transfer from astrocytes to POMC neurons to maintain glucose and cholesterol homeostasis
www.cell.com/cell-reports/fulltext/S2211-1247(24)01334-2
Dec 25, 2024
1
Endogenous nitric oxide derived from NOS I or II in thoracic spinal cord exerts opposing tonic modulation on sympathetic vasomotor tone via disparate mechanisms in anesthetized rats | American Journal of Physiology-Heart and Circulatory Physiology
journals.physiology.org/doi/full/10.1152/ajpheart.00246.2016
Dec 19, 2024
Sympathetic preganglionic neurons contain nitric oxide synthase and project to the superior cervical ganglion: Combined application of retrograde neuronal tracer and NADPH-diaphorase histochemistry
www.sciencedirect.com/science/article/abs/pii/036192309400234R?via%3Dihub
Dec 18, 2024
Nitric oxide and excitatory postsynaptic currents in immature rat sympathetic preganglionic neurons in vitro
www.sciencedirect.com/science/article/pii/S0306452296006124?via%3Dihub
Dec 18, 2024
Calcium-activated release of nitric oxide potentiates excitatory synaptic potentials in immature rat sympathetic preganglionic neurons | Journal of Neurophysiology
journals.physiology.org/doi/abs/10.1152/jn.1995.74.6.2600?checkFormatAccess=true
Dec 18, 2024