How can I remove batch effects among samples in Cell Ranger?
kb.10xgenomics.com/hc/en-us/articles/360000559571-How-can-I-remove-batch-effects-among-samples-in-Cell-Ranger
Nov 8, 2024
1
Single-Nucleus RNA Sequencing of the Hypothalamic Arcuate Nucleus of C57BL/6J Mice After Prolonged Diet-Induced Obesity | Hypertension
www.ahajournals.org/doi/10.1161/HYPERTENSIONAHA.120.15137?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
Nov 6, 2024
1
Bioart
bioart.niaid.nih.gov/
Nov 5, 2024
Inferring neuron-neuron communications from single-cell transcriptomics through NeuronChat - Nature Communications
www.nature.com/articles/s41467-023-36800-w
Nov 3, 2024
Screening cell–cell communication in spatial transcriptomics via collective optimal transport - Nature Methods
www.nature.com/articles/s41592-022-01728-4
Oct 24, 2024
SCENIC: single-cell regulatory network inference and clustering - Nature Methods
www.nature.com/articles/nmeth.4463
Oct 23, 2024
Weighted enrichment method for prediction of transcription regulators from transcriptome and global chromatin immunoprecipitation data
academic.oup.com/nar/article/44/11/5010/2468313
Oct 23, 2024
REGGAE: a novel approach for the identification of key transcriptional regulators
academic.oup.com/bioinformatics/article/34/20/3503/4993882
Oct 23, 2024
Tools for efficient analysis of neurons in a 3D reference atlas of whole mouse spinal cord
www.sciencedirect.com/science/article/pii/S2667237521001260?via%3Dihub
Oct 18, 2024
1
Onecut transcription factors act upstream of Isl1 to regulate spinal motoneuron diversification
journals.biologists.com/dev/article/139/17/3109/45273/Onecut-transcription-factors-act-upstream-of-Isl1
Oct 8, 2024
1
Parallel Pbx-Dependent Pathways Govern the Coalescence and Fate of Motor Columns
www.sciencedirect.com/science/article/pii/S0896627316304597?via%3Dihub
Oct 7, 2024
The histone demethylase Kdm6b regulates subtype diversification of mouse spinal motor neurons during development - Nature Communications
www.nature.com/articles/s41467-022-28636-7
Oct 7, 2024
1
A Postmitotic Role for Isl-Class LIM Homeodomain Proteins in the Assignment of Visceral Spinal Motor Neuron Identity
www.sciencedirect.com/science/article/pii/S089662730400011X?via%3Dihub
Oct 7, 2024
4
Frontiers | Motor neurons and the generation of spinal motor neurons diversity
www.frontiersin.org/journals/cellular-neuroscience/articles/10.3389/fncel.2014.00293/full
Oct 6, 2024
1
The Dorsal Aorta Initiates a Molecular Cascade That Instructs Sympatho-Adrenal Specification
www.science.org/doi/10.1126/science.1222369
Oct 4, 2024
Molecular Control of the Neural Crest and Peripheral Nervous System Development
www.sciencedirect.com/science/article/pii/S0070215314000088
Oct 4, 2024
31
Transcriptionally defined amygdala subpopulations play distinct roles in innate social behaviors - Nature Neuroscience
www.nature.com/articles/s41593-023-01475-5
Oct 2, 2024
Sexually Dimorphic Control of Parenting Behavior by the Medial Amygdala
www.sciencedirect.com/science/article/pii/S0092867419300571?via%3Dihub
Oct 2, 2024
Motor innervation directs the correct development of the mouse sympathetic nervous system - Nature Communications
www.nature.com/articles/s41467-024-51290-0
Oct 1, 2024
Frontiers | Modulation of the thermosensory system by oxytocin
www.frontiersin.org/journals/molecular-neuroscience/articles/10.3389/fnmol.2022.1075305/full
Sep 27, 2024
1
MarkerMap: nonlinear marker selection for single-cell studies - npj Systems Biology and Applications
www.nature.com/articles/s41540-024-00339-3?fromPaywallRec=false
Sep 25, 2024
1
A scalable SCENIC workflow for single-cell gene regulatory network analysis - Nature Protocols
www.nature.com/articles/s41596-020-0336-2
Sep 25, 2024
1
Tiered sympathetic control of cardiac function revealed by viral tracing and single cell transcriptome profiling
elifesciences.org/articles/86295
Sep 25, 2024
1
Opto-seq reveals input-specific immediate-early gene induction in ventral tegmental area cell types
www.sciencedirect.com/science/article/pii/S0896627324003738?via%3Dihub
Sep 24, 2024
2
UCS: a unified approach to cell segmentation for subcellular spatial transcriptomics
www.biorxiv.org/content/10.1101/2024.07.08.601384v1.full
Sep 19, 2024
1
Single-cell and spatial atlases of spinal cord injury in the Tabulae Paralytica - Nature
www.nature.com/articles/s41586-024-07504-y
Sep 19, 2024
1
Estrogen-sensitive medial preoptic area neurons coordinate torpor in mice - Nature Communications
www.nature.com/articles/s41467-020-20050-1
Sep 8, 2024
Why prefer the golden Syrian hamster (Mesocricetus auratus) to the Wistar rat in experimental studies on plasma lipoprotein metabolism?
www.sciencedirect.com/science/article/pii/0305049194900582
Aug 16, 2024
1
A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality
www.sciencedirect.com/science/article/pii/S0092867418308031
Aug 15, 2024
1
c-fos induction in the choroid plexus, tanycytes and pars tuberalis is an early indicator of spontaneous arousal from torpor in a deep hibernator
www.biorxiv.org/content/10.1101/2023.12.19.572338v2
Aug 7, 2024
1
Single-Cell Sequencing of Brain Cell Transcriptomes and Epigenomes
www.sciencedirect.com/science/article/pii/S0896627320309697?via%3Dihub
Jul 31, 2024
1
ezSingleCell: an integrated one-stop single-cell and spatial omics analysis platform for bench scientists - Nature Communications
www.nature.com/articles/s41467-024-48188-2
Jul 24, 2024
1
Library size normalization affects spatial domain identification - Nature Genetics
www.nature.com/articles/s41588-024-01815-6
Jul 24, 2024
1
Multiscale topology classifies cells in subcellular spatial transcriptomics - Nature
www.nature.com/articles/s41586-024-07563-1
Jul 24, 2024
1
scHolography: a computational method for single-cell spatial neighborhood reconstruction and analysis - Genome Biology
genomebiology.biomedcentral.com/articles/10.1186/s13059-024-03299-3
Jul 24, 2024
1
Visual analysis of spatial transcriptomics data with RedeViz
www.biorxiv.org/content/10.1101/2024.07.09.602652v1.full
Jul 24, 2024
1
Visual analysis of spatial transcriptomics data with RedeViz
www.biorxiv.org/content/10.1101/2024.07.09.602652v1
Jul 24, 2024
1
UCS: a unified approach to cell segmentation for subcellular spatial transcriptomics
www.biorxiv.org/content/10.1101/2024.07.08.601384v1
Jul 24, 2024
1
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Single-Cell, Single-Nucleus and Xenium-Based Spatial Transcriptomics Analyses Reveal Inflammatory Activation and Altered Cell Interactions in the Hippocampus in Mice with Temporal Lobe Epilepsy.
www.researchsquare.com/article/rs-4590465/v1
Jul 24, 2024
1
A Hypothalamic Circuit that Modulates Feeding and Parenting Behaviors
www.biorxiv.org/content/10.1101/2024.07.22.604437v1
Jul 24, 2024
1
A scalable platform for the development of cell-type-specific viral drivers
elifesciences.org/articles/48089
Jul 18, 2024
A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA - Scientific Reports
www.nature.com/articles/s41598-017-04426-w
Jul 2, 2024
1
【R】トランスクリプトーム解析のためのGO解析まとめ
shiokoji11235.com/go-analysis-for-transcriptome-analysis
Jul 1, 2024
1
Do descending influences alternate to produce episodic breathing?
www.sciencedirect.com/science/article/abs/pii/S0034568797000960?via%3Dihub
Jun 25, 2024
Autonomic control of circulation during the hibernating cycle in ground squirrels
physoc.onlinelibrary.wiley.com/doi/epdf/10.1113/jphysiol.1963.sp007204
Jun 25, 2024
Peripheral ghrelin stimulates feeding behavior and positive energy balance in a sciurid hibernator
www.sciencedirect.com/science/article/pii/S0018506X11000286?via%3Dihub
Jun 25, 2024
To eat or not to eat: the effect of AICAR on food intake regulation in yellow-bellied marmots (Marmota flaviventris)
journals.biologists.com/jeb/article/213/12/2031/9901/To-eat-or-not-to-eat-the-effect-of-AICAR-on-food
Jun 25, 2024
11
Towards understanding the neural origins of hibernation
journals.biologists.com/jeb/article/225/1/jeb229542/273864/Towards-understanding-the-neural-origins-of
Jun 25, 2024
63
Thermoregulatory inversion: a novel thermoregulatory paradigm | American Journal of Physiology-Regulatory, Integrative and Comparative Physiology
journals.physiology.org/doi/full/10.1152/ajpregu.00022.2017
Jun 25, 2024
Hibernation: Neural Aspects | Annual Reviews
www.annualreviews.org/content/journals/10.1146/annurev.ph.41.030179.001513
Jun 25, 2024
Seasonal and Regional Differences in Gene Expression in the Brain of a Hibernating Mammal
journals.plos.org/plosone/article?id=10.1371/journal.pone.0058427
Jun 25, 2024
11