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SIMA: Python software for analysis of dynamic fluorescence imaging data
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Random-access wide-field mesoscopy for centimetre-scale imaging of biodynamics with subcellular resolution - Nature Photonics
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An integrative approach for analyzing hundreds of neurons in task performing mice using wide-field calcium imaging - Scientific Reports
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Automatic Identification of Functional Clusters in fMRI Data using Spatial Information
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Spatial and temporal independent component analysis of functional MRI data containing a pair of task‐related waveforms
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Ten Key Observations on the Analysis of Resting-state Functional MR Imaging Data Using Independent Component Analysis
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Table 1 Comparison of the biophysical characteristics of GCaMP6f and GCaMP6f<sub><i>u</i></sub>.
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Clustering of InsP3 receptors by InsP3 retunes their regulation by InsP3 and Ca2+ - Nature
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Biochemistry of calcium oscillations
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ConnSearch: A framework for functional connectivity analysis designed for interpretability and effectiveness at limited sample sizes
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Spontaneous cortical activity alternates between motifs defined by regional axonal projections
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Imaging of Functional Connectivity in the Mouse Brain
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Wide-Field Calcium Imaging of Neuronal Network Dynamics In Vivo
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MCA1 and MCA2 That Mediate Ca2+ Uptake Have Distinct and Overlapping Roles in Arabidopsis
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Form Factor
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Dynamics and mechanisms of intracellular calcium waves elicited by tandem bubble-induced jetting flow | Proceedings of the National Academy of Sciences
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Functional Calcium Imaging in Developing Cortical Networks (Video) | JoVE
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Influence of structural and functional brain connectivity on age-related differences in fluid cognition
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Application of Membrane and Cell Wall Selective Fluorescent Dyes for Live-Cell Imaging of Filamentous Fungi (Video) | JoVE
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From calcium imaging to graph topology
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Functional network properties derived from wide-field calcium imaging differ with wakefulness and across cell type
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Functional Connectivity and Networks Underlying Complex Tool-Use Movement in Assembly Workers: An fMRI Study
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Influence of ROI selection on resting state functional connectivity: an individualized approach for resting state fMRI analysis
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NITRC: Graph Theory GLM (GTG) MATLAB Toolbox: Tool/Resource Info
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Figures and data in Circular and unified analysis in network neuroscience
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Software | Molecular Neuroengineering Lab
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An integrated microfluidic/microelectrode array for the study of activity-dependent intracellular dynamics in neuronal networks - Lab on a Chip (RSC Publishing) DOI:10.1039/C8LC00694F
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Automated quantification of neuronal networks and single-cell calcium dynamics using calcium imaging
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Faster Gastrointestinal Transit, Reduced Small Intestinal Smooth Muscle Tone and Dysmotility in the Nlgn3R451C Mouse Model of Autism
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GutMap: A New Interface for Analysing Regional Motility Patterns in ex vivo Mouse Gastrointestinal Preparations
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Robust single particle tracking in live cell time-lapse sequences
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May 2, 2024
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Dissection of molecular assembly dynamics by tracking orientation and position of single molecules in live cells
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Actin retrograde flow actively aligns and orients ligand-engaged integrins in focal adhesions | Proceedings of the National Academy of Sciences
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Automated characterization and monitoring of material shape using Riemannian geometry
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Gene-by-environment interactions in plants: Molecular mechanisms, environmental drivers, and adaptive plasticity
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Receptors, sparks and waves in a fire-diffuse-fire framework for calcium release
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A ROS-Assisted Calcium Wave Dependent on the AtRBOHD NADPH Oxidase and TPC1 Cation Channel Propagates the Systemic Response to Salt Stress
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Temporal integration of auxin information for the regulation of patterning
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The fast and the furious: rapid long-range signaling in plants
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Integration of Electrical Signals and Phytohormones in the Control of Systemic Response
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Monte Carlo extrinsic estimators of manifold-valued parameters
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Diffusion maps for high-dimensional single-cell analysis of differentiation data
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Riemannian Procrustes Analysis : Transfer Learning for Brain-Computer Interfaces
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Data analysis using Riemannian geometry and applications to chemical engineering
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Accuracy of vascular tortuosity measures using computational modelling - Scientific Reports
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Loss of a highly conserved sterile alpha motif domain gene (WEEP) results in pendulous branch growth in peach trees | Proceedings of the National Academy of Sciences
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Cytoplasmic MTOCs control spindle orientation for asymmetric cell division in plants | Proceedings of the National Academy of Sciences
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Cytoplasmic MTOCs control spindle orientation for asymmetric cell division in plants
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