vkam

vkam

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Joined Nov 6, 2023

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Robust blind spectral unmixing for fluorescence microscopy using unsupervised learning

journals.plos.org/plosone/article?id=10.1371/journal.pone.0225410

May 11, 2024

1

Theory of Atoms in Molecules: The Laplacian of the Electron Density and the Lewis and VSEPR Models

www.chemistry.mcmaster.ca/aim/aim_5.html

laplacian

May 10, 2024

1

Dual Fatty Acyl Modification Determines the Localization and Plasma Membrane Targeting of CBL/CIPK Ca2+ Signaling Complexes in Arabidopsis

www.ncbi.nlm.nih.gov/pmc/articles/PMC2438452/

May 10, 2024

3

The CBL–CIPK Calcium Signaling Network: Unified Paradigm from 20 Years of Discoveries

www.sciencedirect.com/science/article/pii/S1360138520300261?via%3Dihub

May 10, 2024

412

How Spatial Autocorrelation (Global Moran's I) works—ArcGIS Pro | Documentation

pro.arcgis.com/en/pro-app/latest/tool-reference/spatial-statistics/h-how-spatial-autocorrelation-moran-s-i-spatial-st.htm

May 10, 2024

2

SIMA: Python software for analysis of dynamic fluorescence imaging data

www.frontiersin.org/articles/10.3389/fninf.2014.00080/full

May 10, 2024

1

Random-access wide-field mesoscopy for centimetre-scale imaging of biodynamics with subcellular resolution - Nature Photonics

www.nature.com/articles/s41566-024-01422-1

May 10, 2024

7

An integrative approach for analyzing hundreds of neurons in task performing mice using wide-field calcium imaging - Scientific Reports

www.nature.com/articles/srep20986

May 10, 2024

1

Automatic Identification of Functional Clusters in fMRI Data using Spatial Information

www.ncbi.nlm.nih.gov/pmc/articles/PMC3222740/

May 10, 2024

5

Spatial and temporal independent component analysis of functional MRI data containing a pair of task‐related waveforms

www.ncbi.nlm.nih.gov/pmc/articles/PMC6871956/

May 10, 2024

2

Ten Key Observations on the Analysis of Resting-state Functional MR Imaging Data Using Independent Component Analysis

www.ncbi.nlm.nih.gov/pmc/articles/PMC5657522/

May 10, 2024

2

Table 1 Comparison of the biophysical characteristics of GCaMP6f and GCaMP6f<sub><i>u</i></sub>.

www.nature.com/articles/srep38276/tables/1

May 10, 2024

1

Clustering of InsP3 receptors by InsP3 retunes their regulation by InsP3 and Ca2+ - Nature

www.nature.com/articles/nature07763

May 10, 2024

2

Biochemistry of calcium oscillations

www.sciencedirect.com/science/article/pii/S0006291X10003517?via%3Dihub

May 10, 2024

2

ConnSearch: A framework for functional connectivity analysis designed for interpretability and effectiveness at limited sample sizes

www.sciencedirect.com/science/article/pii/S1053811923004251

May 10, 2024

2

Spontaneous cortical activity alternates between motifs defined by regional axonal projections

www.ncbi.nlm.nih.gov/pmc/articles/PMC3928052/

May 10, 2024

4

Imaging of Functional Connectivity in the Mouse Brain

www.ncbi.nlm.nih.gov/pmc/articles/PMC3024435/

May 10, 2024

3

Wide-Field Calcium Imaging of Neuronal Network Dynamics In Vivo

www.ncbi.nlm.nih.gov/pmc/articles/PMC9687960/

May 10, 2024

11

MCA1 and MCA2 That Mediate Ca2+ Uptake Have Distinct and Overlapping Roles in Arabidopsis

www.ncbi.nlm.nih.gov/pmc/articles/PMC2832256/

May 10, 2024

1

Form Factor

web.archive.org/web/20070526092348/http://adg.stanford.edu/aa241/drag/formfactor.html

May 9, 2024

1

Dynamics and mechanisms of intracellular calcium waves elicited by tandem bubble-induced jetting flow | Proceedings of the National Academy of Sciences

www.pnas.org/doi/full/10.1073/pnas.1713905115

May 9, 2024

5

Functional Calcium Imaging in Developing Cortical Networks (Video) | JoVE

app.jove.com/t/3550/functional-calcium-imaging-in-developing-cortical-networks

May 9, 2024

3

Influence of structural and functional brain connectivity on age-related differences in fluid cognition

www.sciencedirect.com/science/article/pii/S0197458020302876

May 9, 2024

8

Application of Membrane and Cell Wall Selective Fluorescent Dyes for Live-Cell Imaging of Filamentous Fungi (Video) | JoVE

www.jove.com/t/60613/application-membrane-cell-wall-selective-fluorescent-dyes-for-live

May 9, 2024

71

The k-means Algorithm: A Comprehensive Survey and Performance Evaluation

www.mdpi.com/2079-9292/9/8/1295

May 4, 2024

1

From calcium imaging to graph topology

direct.mit.edu/netn/article/6/4/1125/111962/From-calcium-imaging-to-graph-topology

May 3, 2024

8

Functional network properties derived from wide-field calcium imaging differ with wakefulness and across cell type

www.sciencedirect.com/science/article/pii/S1053811922008564

May 3, 2024

39

Functional Connectivity and Networks Underlying Complex Tool-Use Movement in Assembly Workers: An fMRI Study

www.ncbi.nlm.nih.gov/pmc/articles/PMC8581229/

May 3, 2024

6

Influence of ROI selection on resting state functional connectivity: an individualized approach for resting state fMRI analysis

www.ncbi.nlm.nih.gov/pmc/articles/PMC4531302/

May 3, 2024

17

NITRC: Graph Theory GLM (GTG) MATLAB Toolbox: Tool/Resource Info

www.nitrc.org/projects/metalab_gtg/

May 3, 2024

1

Figures and data in Circular and unified analysis in network neuroscience

elifesciences.org/articles/79559/figures

May 3, 2024

1

Software | Molecular Neuroengineering Lab

www.seas.upenn.edu/~molneuro/software.html

May 3, 2024

1

An integrated microfluidic/microelectrode array for the study of activity-dependent intracellular dynamics in neuronal networks - Lab on a Chip (RSC Publishing) DOI:10.1039/C8LC00694F

pubs.rsc.org/en/content/articlehtml/2018/lc/c8lc00694f

May 3, 2024

2

Automated quantification of neuronal networks and single-cell calcium dynamics using calcium imaging

www.sciencedirect.com/science/article/pii/S0165027015000217

May 3, 2024

71

Faster Gastrointestinal Transit, Reduced Small Intestinal Smooth Muscle Tone and Dysmotility in the Nlgn3R451C Mouse Model of Autism

www.mdpi.com/1422-0067/25/2/832

May 3, 2024

1

GutMap: A New Interface for Analysing Regional Motility Patterns in ex vivo Mouse Gastrointestinal Preparations

bio-protocol.org/en/bpdetail?id=4831&type=0&searchid=BM1711584000021453&sort=8

May 2, 2024

1

Robust single particle tracking in live cell time-lapse sequences

www.ncbi.nlm.nih.gov/pmc/articles/PMC2747604/

May 2, 2024

2

Dissection of molecular assembly dynamics by tracking orientation and position of single molecules in live cells

www.ncbi.nlm.nih.gov/pmc/articles/PMC5081662/

May 2, 2024

1

Actin retrograde flow actively aligns and orients ligand-engaged integrins in focal adhesions | Proceedings of the National Academy of Sciences

www.pnas.org/doi/full/10.1073/pnas.1701136114

May 2, 2024

3

Automated characterization and monitoring of material shape using Riemannian geometry

www.sciencedirect.com/science/article/pii/S0098135423003952

May 2, 2024

7

Gene-by-environment interactions in plants: Molecular mechanisms, environmental drivers, and adaptive plasticity

www.ncbi.nlm.nih.gov/pmc/articles/PMC9806611/

May 2, 2024

6

Receptors, sparks and waves in a fire-diffuse-fire framework for calcium release

www.sciencedirect.com/science/article/pii/S0079610704000276

May 2, 2024

19

A ROS-Assisted Calcium Wave Dependent on the AtRBOHD NADPH Oxidase and TPC1 Cation Channel Propagates the Systemic Response to Salt Stress

academic.oup.com/plphys/article/171/3/1771/6115258

May 2, 2024

13

Temporal integration of auxin information for the regulation of patterning

www.ncbi.nlm.nih.gov/pmc/articles/PMC7205470/

May 2, 2024

13

The fast and the furious: rapid long-range signaling in plants

www.ncbi.nlm.nih.gov/pmc/articles/PMC8133610/

May 2, 2024

7

Integration of Electrical Signals and Phytohormones in the Control of Systemic Response

www.ncbi.nlm.nih.gov/pmc/articles/PMC9821543/

May 2, 2024

5

Monte Carlo extrinsic estimators of manifold-valued parameters

ieeexplore.ieee.org/document/978385

May 2, 2024

9

Diffusion maps for high-dimensional single-cell analysis of differentiation data

academic.oup.com/bioinformatics/article/31/18/2989/241305

May 1, 2024

5

Riemannian Procrustes Analysis : Transfer Learning for Brain-Computer Interfaces

hal.science/hal-01971856

May 1, 2024

1

Data analysis using Riemannian geometry and applications to chemical engineering

www.sciencedirect.com/science/article/pii/S009813542200357X

May 1, 2024

5

Accuracy of vascular tortuosity measures using computational modelling - Scientific Reports

www.nature.com/articles/s41598-022-04796-w

May 1, 2024

3