Assembling the perfect bacterial genome using Oxford Nanopore and Illumina sequencing
journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1010905
Jul 3, 2024
1
Hybrid genome assembly - Nanopore and Illumina - Bioinformatics Documentation
www.melbournebioinformatics.org.au/tutorials/tutorials/hybrid_assembly/nanopore_assembly/
Jul 3, 2024
6
The Genomic Context for the Evolution and Transmission of Community-Associated Staphylococcus aureus ST59 Through the Food Chain
www.ncbi.nlm.nih.gov/pmc/articles/PMC7090029/
Jul 2, 2024
11
Frontiers | Phylogeographical Analysis Reveals the Historic Origin, Emergence, and Evolutionary Dynamics of Methicillin-Resistant Staphylococcus aureus ST228
www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2020.02063/full
Jul 2, 2024
2
Time-calibrated phylogenetic and chromosomal mobilome analyses of Staphylococcus aureus CC398 reveal geographical and host-related evolution - Nature Communications
www.nature.com/articles/s41467-024-49644-9
Jul 2, 2024
52
Genomic investigation reveals evolution and lifestyle adaptation of endophytic Staphylococcus epidermidis - Scientific Reports
www.nature.com/articles/srep19263
Jul 2, 2024
72
Species determination within Staphylococcus genus by extended PCR-restriction fragment length polymorphism of saoC gene
academic.oup.com/femsle/article/362/1/1/2467540
Jul 2, 2024
2
Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains
www.ncbi.nlm.nih.gov/pmc/articles/PMC4122341/
Jul 2, 2024
4
A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings - Nature Microbiology
www.nature.com/articles/s41564-022-01263-0
Jul 2, 2024
4
Bayesian inference of ancestral dates on bacterial phylogenetic trees
www.ncbi.nlm.nih.gov/pmc/articles/PMC6294524/
Jun 28, 2024
15
Frontiers | A machine learning-based strategy to elucidate the identification of antibiotic resistance in bacteria
www.frontiersin.org/journals/antibiotics/articles/10.3389/frabi.2024.1405296/full?utm_source=twitter&utm_medium=social&utm_content&utm_campaign=imp_impartaut-_05-24_fmicb_en_n--ww
Jun 28, 2024
3
(244) DAY 2 Applications of Phylogenetics; Divergence dating and multi species coalescence 2020 09 18 at - YouTube
www.youtube.com/watch?v=udF0onooTHI
Jun 26, 2024
241
Comprehensive genomic landscape of antibiotic resistance in Staphylococcus epidermidis | mSystems
journals.asm.org/doi/10.1128/msystems.00226-24
Jun 23, 2024
1
Molecular Mechanisms of Drug Resistance in Staphylococcus aureus
www.ncbi.nlm.nih.gov/pmc/articles/PMC9332259/
Jun 23, 2024
5
Machine Learning for Antimicrobial Resistance Research and Drug Development
www.intechopen.com/chapters/81918
Jun 23, 2024
1
A pan-genome-based machine learning approach for predicting antimicrobial resistance activities of the Escherichia coli strains
academic.oup.com/bioinformatics/article/34/13/i89/5045729
Jun 23, 2024
51
Machine Learning and Artificial Intelligence for Pathogen Identification and Antibiotic Resistance Detection: Advancing Diagnostics for Urinary Tract Infections
www.mdpi.com/2673-8430/3/2/22
Jun 23, 2024
2
Staphylococci: Evolving Genomes | Microbiology Spectrum
journals.asm.org/doi/10.1128/microbiolspec.gpp3-0071-2019
Jun 21, 2024
29
Genomics of Natural Populations of Staphylococcus aureus | Annual Reviews
www.annualreviews.org/content/journals/10.1146/annurev-micro-102215-095547
Jun 21, 2024
28
Functional genomics of Staphylococcus aureus
academic.oup.com/bfg/article/12/4/305/325442
Jun 21, 2024
2
Evolutionary and Functional Analysis of Coagulase Positivity among the Staphylococci | mSphere
journals.asm.org/doi/10.1128/msphere.00381-21
Jun 17, 2024
3